A little background on battery "calibration"...
You aren't actually calibrating the battery, you are calibrating the phone measurement of the battery capacity. Rechargeable batteries have a very flat voltage curve, so devices can't determine the amount of battery level left by virtue of the voltage (i.e. voltage at 80% charge is very close to voltage at 20%). So devices monitor the amount of battery they display by measuring the amount of current used through the day. However, in order to do this accurately a good power management algorithm will "learn" what the battery is really capable of. So when you first get a device it's set for a worse case battery decay... as you use it, it learns the extent of the battery capability... but this can ONLY happen if you reach the "cliff" of the voltage curve (i.e. let the phone drain completely a few times). The phone then recalibrates itself to your particular battery characteristics.
This is compared to alkaline batteries which have a fairly constant voltage drop as they drain and the device can use a typical alkaline voltage curve to calculate battery life.
Also, "bumping" a battery will recalibrate the top end of the curve and reset the 100% mark. When a phone is plugged in for a long time in order to protect the battery the charging circuit will cycle on and off. The majority of the time when you take if off the charger it has drooped slightly from true 100% charge. By reconnecting it activates the charge cycle again and then takes a few periodic measurements to determine if the battery is taking more charge. Periodic bumping probably does not damage the battery. Repeating the bumping in a short period of time will very likely overcharge the battery and can dramatically reduce it's life.
In other words, doing a bump charge or two every once in a while is probably good for the phone-battery calibration. Doing repeated bump charges in a row is probably very bad for the extended battery life.
Do whatever you will however, it's your phone. lol