The new market seems to work fine for the most part. I manually updated as well since I got tired of waiting, but one issue remains.... after some apps are updated, the same app may pop up the next day showing that there is an update available for it again. When you try to update it, all you can do is open the app or uninstall it. Once another app comes up with an update, then you can click on update all and both apps will update. I think this is just a bug, albeit, a rather annoying one. Skype updated, and right after it was finished it wanted to update again.
Hope they fix that soon.
Yup, have had that happen to me, too. I manually updated as well. I like the new Market overall but that bug is a little annoying.